Basic Information
Locus ID:
gene-LOC107002390
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 75129562 | 75144315 | - | gene-LOC107002390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 105,568.39 Da | 36.76 | 92.89 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 631 | 895 | 1.48749E-93 | - |
| Pfam | PF13855 | Leucine rich repeat | 148 | 208 | 1.2E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 628 | 892 | 7.4E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 1.5E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 384 | 1.17E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 612 | 931 | 4.32E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 701 | 902 | 5.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 189 | 4.2E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 598 | 700 | 2.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 231 | 4.1E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 232 | 365 | 9.9E-23 | IPR032675 |
| SMART | SM00220 | serkin_6 | 625 | 885 | 1.8E-43 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 123 | 147 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 219 | 243 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 218 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 4.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 267 | 291 | 240.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 625 | 898 | 38.972397 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 631 | 653 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 745 | 757 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37450.3 | - | 0 |
| RefSeq | XP_015055886.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Solanum pennellii] | 0 |
| C0LGU1 | Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana OX=3702 GN=At5g37450 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology