Basic Information
Locus ID:
gene-LOC107002322
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
CTR1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 80296608 | 80308793 | - | gene-LOC107002322 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 91,827.39 Da | 53.27 | 83.86 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 561 | 809 | 2.83957E-131 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 165 | 370 | 2.8E-78 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 556 | 809 | 4.6E-70 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 540 | 809 | 7.42E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 548 | 633 | 6.3E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 634 | 817 | 1.4E-62 | - |
| SMART | SM00220 | serkin_6 | 555 | 813 | 1.0E-66 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 555 | 813 | 44.894543 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 561 | 582 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 676 | 688 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 629 | 642 | 1.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 717 | 727 | 1.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 780 | 802 | 1.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 736 | 758 | 1.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 670 | 688 | 1.1E-12 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_015055777.1 | serine/threonine-protein kinase CTR1-like isoform X1 [Solanum pennellii] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology