Basic Information
Locus ID:
gene-LOC107002166
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 77121995 | 77125571 | - | gene-LOC107002166 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 72,324.46 Da | 38.15 | 74.61 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 269 | 398 | 2.29465E-36 | IPR033734 |
| CDD | cd09612 | Jacalin | 516 | 645 | 3.26985E-39 | IPR033734 |
| CDD | cd09612 | Jacalin | 21 | 150 | 9.07243E-46 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 23 | 152 | 2.7E-32 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 513 | 645 | 1.1E-30 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 269 | 398 | 2.5E-29 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 503 | 644 | 1.11E-39 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 152 | 3.53E-43 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 259 | 398 | 4.58E-38 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 248 | 398 | 5.5E-48 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 150 | 1.2E-55 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 494 | 645 | 6.7E-48 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 269 | 400 | 2.4E-39 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 152 | 1.3E-40 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 513 | 646 | 3.2E-39 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 502 | 646 | 46.584427 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 258 | 400 | 47.22221 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 152 | 53.750134 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 464 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.3 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_027768296.1 | jacalin-related lectin 3 isoform X1 [Solanum pennellii] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology