Basic Information
Locus ID:
gene-LOC107002088
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 79455213 | 79457812 | + | gene-LOC107002088 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 31,577.79 Da | 23.49 | 77.89 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 24 | 122 | 2.27627E-41 | - |
| CDD | cd04216 | Phytocyanin | 135 | 232 | 6.00836E-38 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 145 | 222 | 9.5E-23 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 112 | 1.7E-24 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 122 | 3.46E-32 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 134 | 232 | 1.5E-28 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 132 | 234 | 1.7E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 22 | 127 | 1.9E-34 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 124 | 39.490177 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 135 | 234 | 36.573765 | IPR003245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 259 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31050.1 | Cupredoxin superfamily protein. | 0 |
| RefSeq | XP_027768225.1 | blue copper protein-like [Solanum pennellii] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology