Basic Information
Locus ID:
gene-LOC103724025
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 6471081 | 6487714 | + | gene-LOC103724025 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 66,793.23 Da | 50.34 | 73.74 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 467 | 581 | 6.3E-12 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 252 | 463 | 6.65E-23 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 466 | 582 | 7.01E-20 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 459 | 591 | 5.6E-29 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 258 | 368 | 6.9E-7 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 46 | 100 | 2.7E-5 | - |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 261 | 590 | 138.131668 | IPR030380 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 466 | 591 | 22.280657 | IPR001525 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 543 | 555 | - | IPR018117 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_038980925.1 | DNA (cytosine-5)-methyltransferase DRM2-like isoform X1 [Phoenix dactylifera] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9A2S4 | DNA (Cytosine-5)-methyltransferase DRM2-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103724025 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology