Basic Information
Locus ID:
gene-LOC103723937
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 6717366 | 6768923 | - | gene-LOC103723937 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 45,029.97 Da | 38.74 | 88.66 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00983 | recA | 52 | 379 | 1.46938E-173 | IPR013765 |
| Pfam | PF00154 | recA bacterial DNA recombination protein | 56 | 320 | 1.3E-118 | IPR013765 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 321 | 377 | 8.5E-6 | IPR023400 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 57 | 319 | 1.87E-56 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 83 | 387 | 3.1E-110 | IPR027417 |
| SMART | SM00382 | AAA_5 | 106 | 280 | 1.6E-9 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 53 | 376 | 3.7E-135 | IPR013765 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 84 | 243 | 39.367161 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 253 | 324 | 26.512323 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 265 | 273 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 295 | 324 | 8.6E-76 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 262 | 290 | 8.6E-76 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 349 | 366 | 8.6E-76 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 142 | 171 | 8.6E-76 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 176 | 205 | 8.6E-76 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 214 | 243 | 8.6E-76 | IPR013765 |
| Hamap | MF_00268 | Protein RecA [recA]. | 53 | 381 | 42.909916 | IPR013765 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 417 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19490.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_038970747.1 | DNA repair protein recA homolog 3, mitochondrial [Phoenix dactylifera] | 0 |
| Q9ZUP2 | DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B8ZBS7 | DNA repair protein recA homolog 3, mitochondrial OS=Phoenix dactylifera OX=42345 GN=LOC103723937 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology