Basic Information
Locus ID:
gene-LOC103723395
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 4274637 | 4279528 | + | gene-LOC103723395 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.40 | 62,746.20 Da | 61.98 | 51.31 | -1.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 430 | 509 | 1.9E-17 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 526 | 557 | 1.2E-6 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 430 | 510 | 1.0E-26 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 485 | - | - |
| Coils | Coil | Coil | 466 | 489 | - | - |
| Coils | Coil | Coil | 419 | 456 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_008812521.2 | eukaryotic translation initiation factor 5B-like isoform X1 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B7D3P3 | eukaryotic translation initiation factor 5B-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103723395 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology