Basic Information
Locus ID:
gene-LOC103723068
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 14895508 | 14901436 | + | gene-LOC103723068 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 34,271.39 Da | 42.66 | 81.69 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 37 | 98 | 1.0E-6 | IPR000504 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 28 | 107 | 1.1E-11 | IPR035979 |
| Gene3D | G3DSA:3.30.70.330 | - | 30 | 103 | 5.6E-10 | IPR012677 |
| SMART | SM00360 | rrm1_1 | 35 | 104 | 8.6E-8 | IPR000504 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 34 | 108 | 10.547798 | IPR000504 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67950.3 | RNA-binding (RRM/RBD/RNP motifs) family protein. | 0 |
| RefSeq | XP_008812126.2 | binding partner of ACD11 1-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9LFD5 | Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7D310 | binding partner of ACD11 1-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103723068 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology