Basic Information
Locus ID:
gene-LOC103722235
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000121F | 1139278 | 1153193 | + | gene-LOC103722235 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 93,349.43 Da | 46.23 | 92.89 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 566 | 699 | 1.54788E-24 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 568 | 698 | 2.8E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 721 | 763 | 3.3E-11 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 528 | 766 | 9.19E-59 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 527 | 699 | 2.5E-94 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 700 | 770 | 2.5E-94 | - |
| SMART | SM00382 | AAA_5 | 564 | 701 | 1.3E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 671 | 690 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 792 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 787 | - | - |
| Coils | Coil | Coil | 759 | 779 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_008810932.1 | peroxisome biosynthesis protein PAS1-like isoform X1 [Phoenix dactylifera] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7D0V8 | peroxisome biosynthesis protein PAS1-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103722235 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology