Basic Information
Locus ID:
gene-LOC103722003
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 14247789 | 14250930 | - | gene-LOC103722003 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 51,038.91 Da | 48.56 | 89.52 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 42 | 378 | 1.1E-57 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 279 | 349 | 1.13E-13 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 40 | 387 | 8.43E-55 | IPR017853 |
| Gene3D | G3DSA:3.10.50.10 | - | 278 | 349 | 2.8E-83 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 57 | 378 | 2.8E-83 | - |
| SMART | SM00636 | 2g34 | 39 | 378 | 1.5E-65 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 39 | 395 | 52.886581 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_017701878.2 | class V chitinase-like [Phoenix dactylifera] | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7MX50 | class V chitinase-like OS=Phoenix dactylifera OX=42345 GN=LOC103722003 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology