Basic Information
Locus ID:
gene-LOC103721816
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
DYW family of nucleic acid deaminases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 7485794 | 7487733 | - | gene-LOC103721816 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 55,182.07 Da | 53.51 | 82.94 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14432 | DYW family of nucleic acid deaminases | 397 | 483 | 2.4E-31 | IPR032867 |
| Pfam | PF01535 | PPR repeat | 132 | 148 | 0.94 | IPR002885 |
| Pfam | PF13041 | PPR repeat family | 223 | 267 | 1.4E-7 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 195 | 220 | 0.16 | IPR002885 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 194 | 363 | 1.6E-28 | IPR011990 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 223 | 256 | 2.6E-6 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 220 | 254 | 11.454616 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 82 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G15690.1 | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0 |
| RefSeq | XP_008810384.2 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Phoenix dactylifera] | 0 |
| Q9ZQE5 | Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B7D008 | pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Phoenix dactylifera OX=42345 GN=LOC103721816 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology