Basic Information
Locus ID:
gene-LOC103721655
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 12266144 | 12269441 | + | gene-LOC103721655 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 27,044.80 Da | 51.93 | 66.35 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 19 | 232 | 3.3E-89 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 119 | 222 | 4.32E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 115 | 235 | 1.1E-45 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 121 | 223 | 25.392063 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 87 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_008810170.2 | auxin-responsive protein IAA30 [Phoenix dactylifera] | 0 |
| P13089 | Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7D0G5 | Auxin-responsive protein OS=Phoenix dactylifera OX=42345 GN=LOC103721655 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology