Basic Information
Locus ID:
gene-LOC103721280
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6344169 | 6356193 | + | gene-LOC103721280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 97,148.76 Da | 58.41 | 76.83 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 655 | 688 | 0.0012 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 89 | 329 | 1.8E-16 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 567 | 873 | 8.38E-49 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 541 | 877 | 6.1E-119 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 335 | 5.5E-22 | - |
| SMART | SM00320 | WD40_4 | 781 | 820 | 1.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 836 | 875 | 26.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 648 | 688 | 1.3E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 557 | 595 | 4.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 606 | 645 | 5.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 734 | 772 | 0.0013 | IPR001680 |
| SMART | SM00320 | WD40_4 | 691 | 730 | 0.0089 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 655 | 690 | 9.757418 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 655 | 697 | 12.279615 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 741 | 775 | 8.834696 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 741 | 781 | 10.809215 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 324 | 8.471226 | IPR000719 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 675 | 689 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 759 | 773 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 675 | 689 | 1.6E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 632 | 646 | 1.6E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 759 | 773 | 1.6E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 212 | - | - |
| Coils | Coil | Coil | 337 | 357 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.3 | - | 0 |
| RefSeq | XP_008809643.3 | protein SPA1-RELATED 4-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CYY6 | protein SPA1-RELATED 4-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103721280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology