Basic Information
Locus ID:
gene-LOC103721143
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RING-variant domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 3872134 | 3879658 | - | gene-LOC103721143 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 34,649.64 Da | 48.59 | 86.24 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 48 | 99 | 7.60013E-21 | - |
| Pfam | PF12906 | RING-variant domain | 48 | 98 | 1.3E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 43 | 103 | 8.24E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 31 | 112 | 1.1E-18 | IPR013083 |
| SMART | SM00744 | ringv_2 | 47 | 99 | 7.8E-18 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 40 | 105 | 22.25775 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11020.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_038987232.1 | uncharacterized protein LOC103721143 isoform X1 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B9ANP7 | uncharacterized protein LOC103721143 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103721143 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology