Basic Information
Locus ID:
gene-LOC103721133
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 24390535 | 24413833 | + | gene-LOC103721133 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.73 | 37,549.89 Da | 44.08 | 81.31 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 41 | 80 | 1.2E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 100 | 221 | 4.55E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 39 | 82 | 1.96E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 38 | 79 | 1.2E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 82 | 233 | 3.8E-10 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 39 | 79 | 9.153042 | IPR001810 |
| ProSitePatterns | PS00198 | 4Fe-4S ferredoxin-type iron-sulfur binding region signature. | 246 | 257 | - | IPR017900 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_008809419.2 | F-box protein SKIP28 [Phoenix dactylifera] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CYW2 | F-box protein SKIP28 OS=Phoenix dactylifera OX=42345 GN=LOC103721133 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology