Basic Information
Locus ID:
gene-LOC103721017
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 3847304 | 3892579 | - | gene-LOC103721017 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 85,609.63 Da | 58.02 | 71.75 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 123 | 224 | 3.41609E-13 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 495 | 741 | 2.18108E-131 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 489 | 740 | 1.2E-68 | IPR001245 |
| Pfam | PF13426 | PAS domain | 129 | 224 | 1.8E-10 | IPR000014 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 473 | 739 | 1.35E-84 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 112 | 224 | 5.23E-19 | IPR035965 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 482 | 566 | 2.7E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 124 | 228 | 4.8E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 567 | 772 | 7.1E-65 | - |
| SMART | SM00091 | pas_2 | 114 | 180 | 5.8E-6 | IPR000014 |
| SMART | SM00220 | serkin_6 | 489 | 742 | 2.6E-59 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 112 | 224 | 4.7E-12 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 489 | 749 | 43.735554 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 112 | 183 | 14.674494 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 608 | 620 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 668 | 690 | 7.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 649 | 659 | 7.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 712 | 734 | 7.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 602 | 620 | 7.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 563 | 576 | 7.3E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 265 | - | - |
| Coils | Coil | Coil | 5 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_008809262.2 | probable serine/threonine-protein kinase roco5 isoform X1 [Phoenix dactylifera] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CYN1 | probable serine/threonine-protein kinase roco5 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103721017 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology