Basic Information
Locus ID:
gene-LOC103720777
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 5661860 | 5672348 | + | gene-LOC103720777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 25,971.90 Da | 51.88 | 62.82 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16745 | RING-HC_AtRMA_like | 31 | 75 | 3.81562E-30 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 32 | 78 | 2.4E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 30 | 86 | 3.18E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 5 | 88 | 7.7E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 33 | 73 | 4.9E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 33 | 74 | 13.374458 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 48 | 57 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19310.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_008808880.2 | E3 ubiquitin-protein ligase RNF185-like [Phoenix dactylifera] | 0 |
| Q96GF1 | E3 ubiquitin-protein ligase RNF185 OS=Homo sapiens OX=9606 GN=RNF185 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8ZFQ2 | RING-type E3 ubiquitin transferase OS=Phoenix dactylifera OX=42345 GN=LOC103720777 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology