Basic Information
Locus ID:
gene-LOC103720648
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 7201880 | 7205509 | - | gene-LOC103720648 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 66,119.95 Da | 54.20 | 55.76 | -1.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 561 | 592 | 3.2E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 460 | 544 | 4.2E-18 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 460 | 545 | 3.6E-28 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 281 | - | - |
| Coils | Coil | Coil | 498 | 518 | - | - |
| Coils | Coil | Coil | 452 | 486 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_008808678.1 | titin homolog isoform X1 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B7CXL3 | titin homolog isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103720648 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology