Basic Information
Locus ID:
gene-LOC103720574
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001404F | 59309 | 69444 | + | gene-LOC103720574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 69,773.79 Da | 51.11 | 94.90 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 122 | 3.89147E-47 | - |
| Pfam | PF03000 | NPH3 family | 212 | 474 | 1.8E-94 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 114 | 2.7E-10 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 114 | 3.77E-20 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 11 | 146 | 3.4E-15 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 127 | 5.0E-6 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 212 | 498 | 93.235649 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 97 | 12.557019 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 604 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 603 | - | - |
| Coils | Coil | Coil | 546 | 573 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_038978146.1 | BTB/POZ domain-containing protein At1g30440-like [Phoenix dactylifera] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B8ZV34 | BTB/POZ domain-containing protein At1g30440-like OS=Phoenix dactylifera OX=42345 GN=LOC103720574 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology