Basic Information
Locus ID:
gene-LOC103720458
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 29253332 | 29254648 | + | gene-LOC103720458 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.69 | 45,638.72 Da | 47.33 | 86.36 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 88 | 425 | 1.74986E-80 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 89 | 260 | 1.7E-59 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 284 | 421 | 2.8E-23 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 84 | 425 | 1.6E-95 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 264 | 428 | 1.7E-42 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 69 | 260 | 1.0E-57 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 89 | 421 | 47.069515 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 305 | 316 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 104 | 115 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 95 | 115 | 9.1E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 305 | 316 | 9.1E-5 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_008808386.2 | aspartic proteinase CDR1-like [Phoenix dactylifera] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CXA2 | aspartic proteinase CDR1-like OS=Phoenix dactylifera OX=42345 GN=LOC103720458 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology