Basic Information
Locus ID:
gene-LOC103720270
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Heat stress transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000353F | 72369 | 75178 | + | gene-LOC103720270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.65 | 35,857.27 Da | 52.78 | 62.63 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 31 | 120 | 9.8E-31 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 27 | 120 | 8.98E-33 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 26 | 121 | 2.3E-35 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 27 | 120 | 3.1E-54 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 70 | 94 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 69 | 81 | 2.5E-18 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 31 | 54 | 2.5E-18 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 82 | 94 | 2.5E-18 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| Coils | Coil | Coil | 173 | 200 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G36990.1 | heat shock factor 4. encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins. | 0 |
| RefSeq | XP_008808108.2 | heat stress transcription factor B-1-like [Phoenix dactylifera] | 0 |
| Q67TP9 | Heat stress transcription factor B-1 OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CWV2 | heat stress transcription factor B-1-like OS=Phoenix dactylifera OX=42345 GN=LOC103720270 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology