HalophFGD

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Basic Information
Locus ID: gene-LOC103720058
Species & Taxonomic ID: Phoenix dactylifera & 42345
Genome Assembly: GCF_009389715.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr13 156975 158048 + gene-LOC103720058
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.63 39,791.75 Da 50.90 92.05 -0.08
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 18 58 2.7E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 17 83 1.31E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 15 64 8.3E-7 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_008807808.2 uncharacterized protein LOC103720058 [Phoenix dactylifera] 0
TrEMBL A0A8B7CW21 uncharacterized protein LOC103720058 OS=Phoenix dactylifera OX=42345 GN=LOC103720058 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Arecaceae Phoenix dactylifera 2 gene-LOC103720058, gene-LOC120104557
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno04g18060, gene.Cymno05g00800, gene.Cymno05g00830
Hydrocharitaceae Thalassia testudinum 2 gene.Thate02g14040, gene.Thate09g04500
Posidoniaceae Posidonia oceanica 16 gene.Posoc01g02010, gene.Posoc01g02020, gene.Posoc01g02060 ...
gene.Posoc01g28460, gene.Posoc01g32550, gene.Posoc01g39780, gene.Posoc02g11520, gene.Posoc02g20470, gene.Posoc02g20480, gene.Posoc10g11770, gene.Posoc10g11780, gene.Posoc10g11800, gene.Posoc10g11820, gene.Posoc10g11830, gene.Posoc10g11850, gene.Posoc10g11870
Tamaricaceae Tamarix chinensis 1 TC12G1454
Zosteraceae Zostera marina 1 Zosma06g00150.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.