Basic Information
Locus ID:
gene-LOC103719555
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 12002772 | 12025511 | + | gene-LOC103719555 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 98,043.90 Da | 73.67 | 62.13 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 812 | 851 | 5.67926E-20 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 810 | 856 | 4.8E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 811 | 857 | 1.61E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 795 | 862 | 1.7E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 812 | 851 | 10.423858 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 471 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 276 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_038982731.1 | uncharacterized protein LOC103719555 isoform X1 [Phoenix dactylifera] | 0 |
| P29503 | Protein neuralized OS=Drosophila melanogaster OX=7227 GN=neur PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B9A7U3 | uncharacterized protein LOC103719555 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103719555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology