Basic Information
Locus ID:
gene-LOC103718969
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Variant SH3 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 26305206 | 26317190 | - | gene-LOC103718969 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 44,613.98 Da | 54.16 | 83.87 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 333 | 381 | 4.7E-12 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 330 | 385 | 1.17E-16 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 43 | 255 | 1.79E-21 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 43 | 268 | 6.8E-8 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 313 | 394 | 3.2E-17 | - |
| SMART | SM00326 | SH3_2 | 329 | 384 | 1.7E-14 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 326 | 385 | 21.26734 | IPR001452 |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 367 | 380 | 8.8E-6 | - |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 331 | 351 | 8.8E-6 | - |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 351 | 367 | 8.8E-6 | - |
| Coils | Coil | Coil | 190 | 210 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_008806221.2 | SH3 domain-containing protein 2-like isoform X1 [Phoenix dactylifera] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CTS0 | SH3 domain-containing protein 2-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103718969 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology