Basic Information
Locus ID:
gene-LOC103718720
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Thiamine pyrophosphate enzyme, central domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000139F | 854324 | 858548 | + | gene-LOC103718720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 62,576.53 Da | 29.00 | 90.95 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 378 | 560 | 2.99442E-87 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 19 | 180 | 3.57464E-90 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 423 | 548 | 6.2E-14 | IPR011766 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 213 | 324 | 2.5E-20 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 16 | 183 | 2.5E-33 | IPR012001 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 16 | 191 | 2.0E-42 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 378 | 572 | 3.57E-41 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 208 | 354 | 1.64E-31 | IPR029035 |
| Gene3D | G3DSA:3.40.50.970 | - | 12 | 188 | 1.4E-58 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 202 | 365 | 1.4E-39 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 370 | 562 | 3.9E-55 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 10 | 572 | 1.0E-206 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_008805886.2 | pyruvate decarboxylase 1 [Phoenix dactylifera] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CTR7 | pyruvate decarboxylase OS=Phoenix dactylifera OX=42345 GN=LOC103718720 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology