Basic Information
Locus ID:
gene-LOC103718375
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000233F | 495857 | 501381 | - | gene-LOC103718375 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 97,956.70 Da | 42.31 | 102.64 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 208 | 268 | 8.0E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 730 | 786 | 2.8E-10 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 614 | 628 | 0.66 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 353 | 412 | 4.0E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 127 | 172 | 9.3E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 480 | 815 | 1.12E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 159 | 466 | 1.17E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 121 | 326 | 4.8E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 588 | 698 | 2.9E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 724 | 844 | 4.8E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 587 | 2.9E-66 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 612 | 636 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 279 | 303 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 773 | 796 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 327 | 351 | 4.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 659 | 683 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 375 | 399 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 749 | 772 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 231 | 254 | 160.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 773 | 802 | 36.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 659 | 685 | 470.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 612 | 631 | 430.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 255 | 278 | 37.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 327 | 350 | 310.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 399 | 419 | 13.0 | - |
| SMART | SM00369 | LRR_typ_2 | 495 | 518 | 340.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 351 | 380 | 55.0 | - |
| SMART | SM00369 | LRR_typ_2 | 255 | 278 | 39.0 | IPR003591 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 258 | 271 | 5.4E-7 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 773 | 786 | 5.4E-7 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04220.1 | receptor like protein 46. | 0 |
| RefSeq | XP_017701018.3 | receptor-like protein 46 [Phoenix dactylifera] | 0 |
| F4JGB6 | Receptor-like protein 46 OS=Arabidopsis thaliana OX=3702 GN=RLP46 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8B7MW32 | receptor-like protein 46 OS=Phoenix dactylifera OX=42345 GN=LOC103718375 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_18890 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah021381 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g056200 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000032386 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.3BG0017740 |
| Anacardiaceae | Pistacia vera | 6 | pistato.v30085600, pistato.v30085610, pistato.v30085720 ... |
| Apiaceae | Apium graveolens | 5 | Ag1G01409, Ag1G01533, Ag1G01534, Ag3G00393, Ag9G01364 |
| Arecaceae | Cocos nucifera | 1 | scaffold001583G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103718375 |
| Asteraceae | Flaveria trinervia | 2 | Ftri16G03062, Ftri16G18592 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G04220.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10027707m.g.v1.0, Thhalv10027711m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g02900.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB04g018820.2N, BniB04g018840.2N, BniB07g033940.2N |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.2115, evm.TU.LG15.1016 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.19 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-10341 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-20621 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17663 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000018l.391 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00002965 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24363 |
| Salicaceae | Populus euphratica | 1 | populus_peu04482 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132607114 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_8519 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1643 |