Basic Information
Locus ID:
gene-LOC103718331
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 4029805 | 4031528 | + | gene-LOC103718331 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 41,634.10 Da | 48.14 | 77.29 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08238 | Sel1 repeat | 216 | 245 | 0.049 | IPR006597 |
| Pfam | PF08238 | Sel1 repeat | 144 | 156 | 160.0 | IPR006597 |
| Pfam | PF08238 | Sel1 repeat | 176 | 214 | 0.01 | IPR006597 |
| Pfam | PF01753 | MYND finger | 322 | 361 | 3.4E-7 | IPR002893 |
| SUPERFAMILY | SSF81901 | HCP-like | 127 | 246 | 2.22E-13 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 58 | 111 | 1.92E-5 | IPR036047 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 317 | 366 | 3.92E-10 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 310 | 365 | 1.3E-10 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 109 | 267 | 4.3E-18 | IPR011990 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 319 | 361 | 10.980436 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 49 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_008805330.1 | F-box protein At1g67340-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CSG7 | F-box protein At1g67340-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103718331 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology