Basic Information
Locus ID:
gene-LOC103718209
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 32424568 | 32431549 | - | gene-LOC103718209 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 123,673.08 Da | 44.84 | 96.52 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 857 | 1125 | 4.30215E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 49 | 88 | 9.1E-13 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 854 | 1050 | 2.1E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 187 | 247 | 6.2E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 613 | 672 | 6.2E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 309 | 331 | 0.27 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 261 | 283 | 0.086 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 166 | 183 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 216 | 725 | 5.44E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 830 | 1122 | 4.72E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 80 | 275 | 2.07E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 814 | 926 | 8.8E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 927 | 1134 | 1.1E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 126 | 440 | 1.4E-79 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 122 | 1.3E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 444 | 749 | 1.2E-50 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 659 | 682 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 611 | 635 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 683 | 706 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 164 | 187 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 307 | 331 | 22.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 851 | 1144 | 1.6E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 259 | 283 | 53.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 851 | 1125 | 37.474194 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 971 | 983 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 857 | 879 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 213 | 226 | 1.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 659 | 672 | 1.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_008805135.2 | LRR receptor-like serine/threonine-protein kinase RPK2 [Phoenix dactylifera] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CS09 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Phoenix dactylifera OX=42345 GN=LOC103718209 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology