Basic Information
Locus ID:
gene-LOC103718173
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 20877980 | 20881091 | + | gene-LOC103718173 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 65,334.23 Da | 31.83 | 92.67 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 46 | 207 | 7.23495E-91 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 405 | 587 | 4.38399E-89 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 240 | 352 | 1.7E-21 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 43 | 211 | 9.8E-34 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 450 | 575 | 3.4E-17 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 43 | 221 | 2.95E-43 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 405 | 599 | 1.27E-43 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 235 | 381 | 2.18E-33 | IPR029035 |
| Gene3D | G3DSA:3.40.50.1220 | - | 230 | 392 | 4.6E-43 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 40 | 216 | 3.7E-59 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 399 | 586 | 6.1E-58 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 38 | 599 | 2.1E-213 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_008805101.2 | pyruvate decarboxylase 1-like [Phoenix dactylifera] | 0 |
| P28516 | Pyruvate decarboxylase 1 OS=Zea mays OX=4577 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CRY7 | pyruvate decarboxylase OS=Phoenix dactylifera OX=42345 GN=LOC103718173 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology