Basic Information
Locus ID:
gene-LOC103718137
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 5667109 | 5672286 | + | gene-LOC103718137 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 65,147.96 Da | 29.29 | 91.28 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 405 | 587 | 5.07271E-87 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 46 | 207 | 4.75877E-91 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 43 | 211 | 5.2E-36 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 240 | 351 | 1.5E-20 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 452 | 575 | 1.7E-16 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 43 | 219 | 5.68E-44 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 405 | 594 | 3.93E-43 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 235 | 381 | 7.64E-33 | IPR029035 |
| Gene3D | G3DSA:3.40.50.1220 | - | 230 | 392 | 6.1E-41 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 397 | 590 | 4.1E-58 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 39 | 216 | 4.0E-60 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 37 | 599 | 5.7E-207 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_038988349.1 | pyruvate decarboxylase 1-like [Phoenix dactylifera] | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B9AY62 | pyruvate decarboxylase OS=Phoenix dactylifera OX=42345 GN=LOC103718137 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology