Basic Information
Locus ID:
gene-LOC103718133
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 6038324 | 6047877 | + | gene-LOC103718133 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 213,818.30 Da | 44.42 | 71.61 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 1011 | 1095 | 6.34671E-28 | - |
| Pfam | PF00855 | PWWP domain | 1011 | 1094 | 1.1E-17 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 1008 | 1111 | 7.82E-25 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 1003 | 1105 | 4.5E-25 | - |
| SMART | SM00293 | PWWP_4 | 1011 | 1072 | 1.5E-9 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 1013 | 1074 | 14.715672 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1244 | 1260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1823 | 1837 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1232 | 1260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1796 | 1904 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1442 | 1472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1489 | 1512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1846 | 1861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1869 | 1885 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1313 | 1332 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_038988364.1 | uncharacterized protein LOC103718133 isoform X1 [Phoenix dactylifera] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9AY78 | uncharacterized protein LOC103718133 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103718133 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology