Basic Information
Locus ID:
gene-LOC103718118
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 5785006 | 5797501 | + | gene-LOC103718118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 61,385.07 Da | 40.73 | 83.53 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 71 | 329 | 3.25061E-137 | - |
| Pfam | PF00069 | Protein kinase domain | 77 | 330 | 1.9E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 376 | 438 | 1.1E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 450 | 515 | 9.8E-15 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 70 | 337 | 1.29E-84 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 358 | 541 | 1.53E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 158 | 338 | 5.0E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 74 | 157 | 1.1E-25 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 339 | 518 | 3.3E-53 | - |
| SMART | SM00054 | efh_1 | 377 | 405 | 5.2E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 72 | 330 | 5.4E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 451 | 479 | 1.0E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 489 | 517 | 3.0E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 413 | 443 | 43.0 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 72 | 330 | 47.622406 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 447 | 482 | 14.42972 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 373 | 408 | 16.689247 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 485 | 520 | 12.923368 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 460 | 472 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 192 | 204 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 386 | 398 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 78 | 101 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 498 | 510 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_008805014.1 | calcium-dependent protein kinase 3-like isoform X1 [Phoenix dactylifera] | 0 |
| Q8LPZ7 | Calcium-dependent protein kinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CSF8 | calcium-dependent protein kinase 3-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103718118 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology