Basic Information
Locus ID:
gene-LOC103718093
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
HMT3
Description:
homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000085F | 237916 | 248212 | + | gene-LOC103718093 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 38,168.62 Da | 37.24 | 87.49 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 24 | 332 | 6.9E-78 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 19 | 339 | 7.32E-84 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 11 | 332 | 7.5E-104 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 137 | 346 | 0.04 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 6 | 115 | 9.4E-8 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 11 | 333 | 47.891796 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_008804975.2 | homocysteine S-methyltransferase 2 [Phoenix dactylifera] | 0 |
| Q9FUM9 | Homocysteine S-methyltransferase 2 OS=Zea mays OX=4577 GN=HMT-2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CRV6 | homocysteine S-methyltransferase 2 OS=Phoenix dactylifera OX=42345 GN=LOC103718093 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology