Basic Information
Locus ID:
gene-LOC103718026
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Cupin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 12383332 | 12386859 | - | gene-LOC103718026 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 37,141.49 Da | 22.47 | 99.80 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 4 | 174 | 2.65813E-64 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 204 | 342 | 2.00488E-55 | - |
| Pfam | PF00190 | Cupin | 200 | 339 | 1.3E-16 | IPR006045 |
| Pfam | PF00190 | Cupin | 10 | 157 | 1.3E-18 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 12 | 342 | 1.39E-38 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 196 | 347 | 9.5E-38 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 7 | 184 | 4.2E-32 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 200 | 340 | 5.1E-14 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 3 | 158 | 8.0E-27 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 317 | 334 | 1.9E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 295 | 313 | 1.9E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 212 | 232 | 1.9E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 259 | 275 | 1.9E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 277 | 292 | 1.9E-8 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_008804882.2 | 11S globulin seed storage protein 2-like [Phoenix dactylifera] | 0 |
| E3SH28 | Prunin 1 Pru du 6.0101 OS=Prunus dulcis OX=3755 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CS99 | 11S globulin seed storage protein 2-like OS=Phoenix dactylifera OX=42345 GN=LOC103718026 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology