Basic Information
Locus ID:
gene-LOC103717825
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RING finger and CHY zinc finger domain-containing protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000077F | 320843 | 334025 | + | gene-LOC103717825 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 37,528.89 Da | 60.75 | 69.60 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14599 | Zinc-ribbon | 251 | 308 | 8.1E-26 | IPR039512 |
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 204 | 246 | 9.6E-9 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 203 | 250 | 1.69E-11 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 140 | 197 | 1.44E-19 | IPR037275 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 186 | 275 | 2.4E-12 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 276 | 313 | 1.8E-18 | - |
| SMART | SM00184 | ring_2 | 204 | 246 | 4.0E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 204 | 247 | 12.194218 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 139 | 203 | 33.269642 | IPR017921 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18650.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_026664536.1 | E3 ubiquitin-protein ligase MIEL1 isoform X1 [Phoenix dactylifera] | 0 |
| Q8VZK0 | E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8JA87 | E3 ubiquitin-protein ligase MIEL1 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103717825 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology