Basic Information
Locus ID:
gene-LOC103717797
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 2043984 | 2055254 | + | gene-LOC103717797 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 65,624.60 Da | 33.58 | 66.66 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 22 | 151 | 2.03062E-48 | IPR033734 |
| CDD | cd09612 | Jacalin | 257 | 386 | 1.2386E-39 | IPR033734 |
| CDD | cd09612 | Jacalin | 456 | 583 | 1.29256E-40 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 22 | 151 | 3.1E-35 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 257 | 386 | 8.7E-28 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 453 | 583 | 1.2E-29 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 440 | 583 | 9.94E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 150 | 2.62E-45 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 247 | 386 | 5.76E-39 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 433 | 583 | 2.2E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 151 | 3.6E-58 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 237 | 386 | 1.1E-48 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 453 | 584 | 2.5E-41 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 257 | 388 | 2.6E-37 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 22 | 152 | 5.3E-43 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 246 | 388 | 48.535301 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 442 | 584 | 49.473221 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 11 | 152 | 54.537987 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.3 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_038990479.1 | jacalin-related lectin 3 isoform X1 [Phoenix dactylifera] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9B3N2 | jacalin-related lectin 3 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103717797 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology