Basic Information
Locus ID:
gene-LOC103717794
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Bromo adjacent homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 2135331 | 2142771 | - | gene-LOC103717794 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 25,215.28 Da | 51.95 | 55.41 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04714 | BAH_BAHCC1 | 22 | 157 | 2.29611E-57 | - |
| Pfam | PF01426 | BAH domain | 23 | 136 | 6.8E-21 | IPR001025 |
| Pfam | PF00628 | PHD-finger | 141 | 189 | 4.6E-10 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 131 | 193 | 5.54E-18 | IPR011011 |
| Gene3D | G3DSA:2.30.30.490 | - | 3 | 133 | 8.4E-30 | IPR043151 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 206 | 4.5E-19 | IPR013083 |
| SMART | SM00439 | BAH_4 | 21 | 137 | 4.5E-42 | IPR001025 |
| SMART | SM00249 | PHD_3 | 141 | 188 | 4.4E-8 | IPR001965 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 21 | 137 | 23.411005 | IPR001025 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 139 | 190 | 9.134 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 142 | 187 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 220 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_008804532.1 | chromatin remodeling protein EBS-like isoform X1 [Phoenix dactylifera] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CR11 | chromatin remodeling protein EBS-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103717794 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology