Basic Information
Locus ID:
gene-LOC103716994
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 21812249 | 21822420 | + | gene-LOC103716994 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 98,164.03 Da | 69.85 | 61.23 | -1.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 809 | 849 | 4.08477E-21 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 807 | 854 | 7.3E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 809 | 855 | 8.39E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 794 | 860 | 1.7E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 810 | 849 | 10.748424 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 540 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 698 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 540 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 247 | - | - |
| Coils | Coil | Coil | 740 | 760 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_038979588.1 | uncharacterized protein LOC103716994 [Phoenix dactylifera] | 0 |
| Q24746 | Protein neuralized OS=Drosophila virilis OX=7244 GN=neur PE=4 SV=1 | 0 | |
| TrEMBL | A0A8B9A6T1 | uncharacterized protein LOC103716994 OS=Phoenix dactylifera OX=42345 GN=LOC103716994 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology