Basic Information
Locus ID:
gene-LOC103716905
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Ubiquitin fusion degradation protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 6711803 | 6735973 | + | gene-LOC103716905 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 36,191.11 Da | 51.31 | 65.40 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 14 | 185 | 6.3E-79 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 110 | 183 | 6.0E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 6 | 108 | 5.7E-44 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 313 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_008803325.1 | ubiquitin fusion degradation protein 1 homolog isoform X1 [Phoenix dactylifera] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8B7CP19 | ubiquitin fusion degradation protein 1 homolog isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103716905 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology