Basic Information
Locus ID:
gene-LOC103716668
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Variant SH3 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 18275072 | 18286871 | - | gene-LOC103716668 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 58,976.04 Da | 54.12 | 71.11 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 465 | 513 | 1.4E-11 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 43 | 255 | 4.97E-21 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 462 | 519 | 3.94E-16 | IPR036028 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 460 | 514 | 3.8E-16 | - |
| SMART | SM00326 | SH3_2 | 461 | 516 | 5.0E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 458 | 517 | 18.799192 | IPR001452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 434 | - | - |
| Coils | Coil | Coil | 183 | 210 | - | - |
| Coils | Coil | Coil | 248 | 268 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_038982874.1 | SH3 domain-containing protein 2-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9AHX4 | SH3 domain-containing protein 2-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103716668 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology