Basic Information
Locus ID:
gene-LOC103716281
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Homocysteine S-methyltransferase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 15218731 | 15223434 | - | gene-LOC103716281 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 40,586.81 Da | 48.05 | 95.19 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 65 | 365 | 5.3E-72 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 60 | 369 | 9.68E-79 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 52 | 365 | 2.3E-96 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 43 | 302 | 4.1E-5 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 328 | 370 | 3.3 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 52 | 366 | 46.939381 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_008802439.2 | homocysteine S-methyltransferase 1 [Phoenix dactylifera] | 0 |
| Q9FUN0 | Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CMM5 | homocysteine S-methyltransferase 1 OS=Phoenix dactylifera OX=42345 GN=LOC103716281 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology