Basic Information
Locus ID:
gene-LOC103715856
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 8797405 | 8799051 | + | gene-LOC103715856 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 41,515.84 Da | 46.51 | 72.88 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08238 | Sel1 repeat | 177 | 214 | 0.32 | IPR006597 |
| Pfam | PF01753 | MYND finger | 322 | 361 | 2.1E-7 | IPR002893 |
| Pfam | PF08238 | Sel1 repeat | 144 | 156 | 46.0 | IPR006597 |
| Pfam | PF08238 | Sel1 repeat | 216 | 245 | 0.29 | IPR006597 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 316 | 366 | 5.76E-10 | - |
| SUPERFAMILY | SSF81901 | HCP-like | 120 | 246 | 2.22E-12 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 310 | 366 | 4.4E-11 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 112 | 269 | 4.3E-17 | IPR011990 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 319 | 361 | 10.919942 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 51 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_017700367.1 | F-box protein At1g67340-like [Phoenix dactylifera] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7MVM3 | F-box protein At1g67340-like OS=Phoenix dactylifera OX=42345 GN=LOC103715856 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology