Basic Information
Locus ID:
gene-LOC103715835
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
JAB/MPN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 14484649 | 14501568 | - | gene-LOC103715835 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 44,532.24 Da | 59.20 | 74.02 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08066 | MPN_AMSH_like | 221 | 394 | 1.37222E-95 | IPR044098 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 218 | 323 | 7.9E-15 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 219 | 350 | 2.48E-19 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 201 | 396 | 8.3E-68 | - |
| SMART | SM00232 | pad1_6 | 219 | 347 | 1.8E-13 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 220 | 350 | 27.634829 | IPR037518 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 33 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10600.1 | associated molecule with the SH3 domain of STAM 2. | 0 |
| RefSeq | XP_038981542.1 | AMSH-like ubiquitin thioesterase 2 isoform X1 [Phoenix dactylifera] | 0 |
| Q6NKP9 | AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=AMSH2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9A765 | AMSH-like ubiquitin thioesterase 2 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103715835 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology