Basic Information
Locus ID:
gene-LOC103715603
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 10389878 | 10391582 | - | gene-LOC103715603 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 42,661.65 Da | 45.32 | 67.37 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 23 | 63 | 2.7E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 141 | 181 | 2.0E-6 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 184 | 229 | 1.4E-12 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 66 | 1.57E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 113 | 384 | 1.7E-41 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 96 | 395 | 5.0E-37 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 73 | 2.5E-7 | - |
| SMART | SM00256 | fbox_2 | 25 | 64 | 0.0034 | IPR001810 |
| SMART | SM00612 | kelc_smart | 196 | 245 | 1.3E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 147 | 195 | 1.0E-6 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_008801509.2 | F-box/kelch-repeat protein SKIP20-like [Phoenix dactylifera] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CLI3 | F-box/kelch-repeat protein SKIP20-like OS=Phoenix dactylifera OX=42345 GN=LOC103715603 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology