Basic Information
Locus ID:
gene-LOC103714957
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001312F | 67130 | 88501 | - | gene-LOC103714957 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 105,708.57 Da | 42.38 | 85.14 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 758 | 912 | 1.17685E-54 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 312 | 911 | 4.4E-82 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 41 | 137 | 1.6E-24 | IPR006615 |
| SUPERFAMILY | SSF143791 | DUSP-like | 17 | 137 | 1.96E-28 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 310 | 914 | 3.92E-109 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 299 | 524 | 2.3E-67 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 11 | 150 | 1.4E-37 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 151 | 239 | 6.7E-15 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 722 | 922 | 1.2E-54 | - |
| SMART | SM00695 | dusp | 37 | 140 | 1.8E-30 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 312 | 914 | 57.75613 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 18 | 137 | 18.887817 | IPR006615 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 856 | 873 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 313 | 328 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10590.1 | ubiquitin-specific protease 10. encodes a member of the ubiquitin-specific protease family, UBP10 | 0 |
| RefSeq | XP_008800670.3 | ubiquitin carboxyl-terminal hydrolase 9-like isoform X1 [Phoenix dactylifera] | 0 |
| Q93Y01 | Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana OX=3702 GN=UBP9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CJS3 | Ubiquitin carboxyl-terminal hydrolase OS=Phoenix dactylifera OX=42345 GN=LOC103714957 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology