Basic Information
Locus ID:
gene-LOC103714685
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 2857105 | 2869382 | + | gene-LOC103714685 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 45,403.54 Da | 32.98 | 99.64 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 82 | 351 | 2.3E-87 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 81 | 351 | 1.28E-42 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 109 | 413 | 1.1E-94 | IPR027417 |
| SMART | SM00382 | AAA_5 | 132 | 290 | 0.0026 | IPR003593 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 285 | 356 | 18.868507 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 110 | 275 | 30.583254 | IPR020588 |
| ProSitePatterns | PS00321 | recA signature. | 297 | 305 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 327 | 356 | 3.5E-46 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 380 | 397 | 3.5E-46 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 294 | 322 | 3.5E-46 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 168 | 197 | 3.5E-46 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 202 | 231 | 3.5E-46 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_008800263.1 | DNA repair protein recA homolog 2, mitochondrial [Phoenix dactylifera] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CJ51 | DNA repair protein recA homolog 2, mitochondrial OS=Phoenix dactylifera OX=42345 GN=LOC103714685 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology