Basic Information
Locus ID:
gene-LOC103714627
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 106940 | 130690 | - | gene-LOC103714627 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 205,053.02 Da | 50.51 | 85.91 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1471 | 1899 | 4.37743E-120 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1518 | 1904 | 3.5E-83 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1463 | 1897 | 2.88E-96 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 190 | 663 | 3.07E-42 | IPR016024 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1775 | 1902 | 4.7E-32 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 187 | 672 | 1.5E-53 | IPR011989 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1410 | 1663 | 4.2E-44 | - |
| SMART | SM00185 | arm_5 | 348 | 386 | 9.3 | IPR000225 |
| SMART | SM00185 | arm_5 | 305 | 345 | 61.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 222 | 263 | 120.0 | IPR000225 |
| SMART | SM00119 | hect_3 | 1484 | 1904 | 2.0E-89 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1567 | 1904 | 57.094883 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 991 | 1084 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1054 | 1080 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 991 | 1034 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 673 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 120 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_038982263.1 | E3 ubiquitin-protein ligase UPL3-like [Phoenix dactylifera] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9AE91 | HECT-type E3 ubiquitin transferase OS=Phoenix dactylifera OX=42345 GN=LOC103714627 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology