Basic Information
Locus ID:
gene-LOC103714620
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 16391834 | 16396923 | - | gene-LOC103714620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 67,296.80 Da | 44.92 | 90.12 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 212 | 478 | 3.1E-96 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 26 | 114 | 2.6E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 18 | 130 | 9.42E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 130 | 2.4E-11 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 122 | 3.4E-4 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 212 | 502 | 95.578758 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 11.957241 | IPR000210 |
| Coils | Coil | Coil | 554 | 574 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_008800153.1 | BTB/POZ domain-containing protein At5g03250-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CJB7 | BTB/POZ domain-containing protein At5g03250-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103714620 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology