Basic Information
Locus ID:
gene-LOC103714578
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5789133 | 5790738 | - | gene-LOC103714578 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.50 | 18,155.05 Da | 37.22 | 85.88 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 94 | 155 | 3.33673E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 92 | 155 | 2.7E-16 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 18 | 79 | 6.9E-16 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 8 | 155 | 3.0E-45 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 2 | 85 | 5.1E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 86 | 163 | 9.9E-25 | - |
| SMART | SM00054 | efh_1 | 54 | 82 | 0.013 | IPR002048 |
| SMART | SM00054 | efh_1 | 94 | 122 | 2.0E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 130 | 158 | 1.1E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 18 | 46 | 3.6E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 126 | 161 | 13.537066 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 90 | 125 | 15.629221 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 50 | 85 | 10.775421 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 14 | 49 | 14.987627 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 27 | 39 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 63 | 75 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 139 | 151 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 103 | 115 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03000.1 | EF hand calcium-binding protein family. Calmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner | 0 |
| RefSeq | XP_008800092.1 | probable calcium-binding protein CML18 [Phoenix dactylifera] | 0 |
| Q9M8U1 | Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CIY8 | probable calcium-binding protein CML18 OS=Phoenix dactylifera OX=42345 GN=LOC103714578 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology