Basic Information
Locus ID:
gene-LOC103714488
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001168F | 97786 | 115967 | - | gene-LOC103714488 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 47,148.62 Da | 34.62 | 115.17 | 0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 279 | 416 | 2.9E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 87 | 242 | 5.7E-21 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 116 | 253 | 6.1E-16 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 265 | 420 | 5.3E-18 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 52 | 419 | 2.0E-124 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 68 | 419 | 3.7E-107 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13320.1 | cation exchanger 2. low affinity calcium antiporter CAX2 | 0 |
| RefSeq | XP_038977569.1 | vacuolar cation/proton exchanger 3-like [Phoenix dactylifera] | 0 |
| Q6K1C4 | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B9A2E5 | Vacuolar cation/proton exchanger OS=Phoenix dactylifera OX=42345 GN=LOC103714488 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology